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neuronflow / BraTS-Toolkit

Code to preprocess, segment, and fuse glioma MRI scans based on the BraTS Toolkit manuscript.
https://www.frontiersin.org/articles/10.3389/fnins.2020.00125/full
GNU Affero General Public License v3.0
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HOW TO INSTALL ANTS FOR BRATS TOOLKIT #34

Closed DanielaTalba1 closed 1 year ago

DanielaTalba1 commented 1 year ago

@neuronflow Hello

please i want to apply the transform matrix that comes out of the BTK (which i used to process my 3d mri images). For the labels of these images to be aligned with the realigned images I need to apply azu labels the transform matrices used to realign the images. I need ANTS that you used. Could you please tell me how to install ANTS that you use?

Thank tou for your reply

Daniela

DanielaTalba1 commented 1 year ago

@neuronflow please i want to install it on windows 10

neuronflow commented 1 year ago

To build our preprocessing image, we build ants from the source. We use a Debian-based image here.

Without knowing all the details, the best idea for your use case seems to work with one of these Windows releases: https://github.com/ANTsX/ANTs/releases

DanielaTalba1 commented 1 year ago

@neuronflow thank you so much.