Improve README

[NathanMolinier]

Description

It looks like some information are missing in the README and it is not that intuitive to use the module:

• [ ] How to open the extension ? (Don't understand step 7.) -- people need to know that they need to click on the dropdown menu for version 5.7.0:

• [ ] Should we create a python environment ? Which python version ?

• [ ] How to download Slicer 5.2.2. -- https://github.com/neuropoly/slicer-manual-annotation/issues/61

• [ ] The videos are a bit old and the UI has changed since

[sandrinebedard]

How to find the config file:

[NathanMolinier]

I'm not able to find the "examples" section in the drop down menu after adding the path and allowing developper mode:

slicer version 5.2.2

[valosekj]

It's not clear to me what "Window Level" and "Window Width" stand for

[tomDag25]

It seems you can automate the window level and window width in the Module section using Automatic W/L. It would be great to make it a default parameter and if you want to change the W/L you can but not force the user to put some arbitrary values.

[AcastaPaloma]

@NathanMolinier did you add the src folder specifically - into the modules section? I think you have to put the direct parent folder of the python file for the extension.

@sandrinebedard You should be able to create a new segmentation and create an output folder from there. Only then you should be able to pick up from an existing output folder for segmentation/classification settings, labels, etc.

[NathanMolinier]

Yes I did it, see my screenshot:

I found this but I don't know how to load the module

Update: I managed to solve the problem by recloning the repository and installing missing python packages. It's not really clear why I had this issue in the first place.

[maxradx]

• [ ] #Add tree in folder organization to specify how it shouldbe organized.

[maxradx]

Work in progress related to updating documentation. Will notify when up-to-date!