neuropoly / slicer-manual-annotation

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How to specify what segmentation is associated with an image? #64

Open jcohenadad opened 1 month ago

jcohenadad commented 1 month ago

From version: eef16bcb5e84cf73b570a2b98c99288b4f7fd23f

After loading a folder (checked no BIDS), I'm seeing the list of NIfTi images:

image

But at this point, what is unclear to me is:

There is a path that is shown below the 'interpolate' button:

image

What does this path correspond to? If it is the segmentation, I suggest adding a clear title above that path to indicate what this is. Also, if it is the segmentation, then what is the logic to retrieve that file name? I see it is under derivatives, but nowhere in the config I specified that path:

image

Also, more problematic: that file name refers to the wrong segmentation (the subject name does not match between the image and the seg).

AcastaPaloma commented 4 weeks ago

I don't think that I am able to replicate the problem of names not matching: image Is it possible to provide the steps to reach that bug?

@jcohenadad