neuropycon / graphpype

Neuropycon package of functions for electrophysiology analysis, can be used from ephypype and nipype
https://neuropycon.github.io/graphpype/
BSD 3-Clause "New" or "Revised" License
21 stars 11 forks source link

[MRG] Inter modules #28

Closed davidmeunier79 closed 5 years ago

davidmeunier79 commented 5 years ago

Added intermodules computation on matrix

codecov[bot] commented 5 years ago

Codecov Report

Merging #28 into master will decrease coverage by 9.11%. The diff coverage is 89.33%.

Impacted file tree graph

@@            Coverage Diff             @@
##           master      #28      +/-   ##
==========================================
- Coverage   81.13%   72.01%   -9.12%     
==========================================
  Files          23       28       +5     
  Lines        1590     2841    +1251     
==========================================
+ Hits         1290     2046     +756     
- Misses        300      795     +495
Impacted Files Coverage Δ
graphpype/interfaces/radatools/rada.py 100% <ø> (ø) :arrow_up:
graphpype/utils.py 86.56% <100%> (+3.23%) :arrow_up:
graphpype/tests/test_utils.py 100% <100%> (ø) :arrow_up:
graphpype/utils_cor.py 95.2% <100%> (ø) :arrow_up:
graphpype/utils_mod.py 98.39% <100%> (+10.89%) :arrow_up:
graphpype/tests/test_utils_mod.py 94.33% <62.5%> (-5.67%) :arrow_down:
graphpype/nodes/correl_mat.py 52.62% <67.44%> (ø)
graphpype/pipelines/tests/test_nii_to_conmat.py 88.88% <75%> (+2.22%) :arrow_up:
graphpype/nodes/modularity.py 73.45% <82.92%> (ø)
graphpype/interfaces/radatools/tests/test_rada.py 92.5% <85.71%> (-2.85%) :arrow_down:
... and 11 more

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codecov-io commented 5 years ago

Codecov Report

Merging #28 into master will increase coverage by 12.63%. The diff coverage is 89.36%.

Impacted file tree graph

@@             Coverage Diff             @@
##           master      #28       +/-   ##
===========================================
+ Coverage   56.85%   69.48%   +12.63%     
===========================================
  Files          31       33        +2     
  Lines        2751     2979      +228     
===========================================
+ Hits         1564     2070      +506     
+ Misses       1187      909      -278
Impacted Files Coverage Δ
graphpype/interfaces/radatools/rada.py 100% <ø> (ø) :arrow_up:
graphpype/utils.py 86.56% <100%> (+3.23%) :arrow_up:
graphpype/pipelines/conmat_to_graph.py 6.79% <100%> (ø) :arrow_up:
graphpype/tests/test_utils.py 100% <100%> (ø) :arrow_up:
graphpype/utils_cor.py 95.2% <100%> (ø) :arrow_up:
graphpype/utils_mod.py 98.39% <100%> (+10.89%) :arrow_up:
graphpype/tests/test_utils_mod.py 94.33% <62.5%> (-5.67%) :arrow_down:
graphpype/nodes/correl_mat.py 52.62% <67.44%> (+25.18%) :arrow_up:
graphpype/pipelines/tests/test_nii_to_conmat.py 88.88% <75%> (+2.22%) :arrow_up:
graphpype/nodes/modularity.py 73.45% <82.92%> (+34.93%) :arrow_up:
... and 12 more

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davidmeunier79 commented 5 years ago

can someone please merge?

Also, I will tag this version as 0.0.5 on pypi, what is the best way to properly do that? @jasmainak @EtienneCmb @annapasca