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neuroscout
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neuroscout-cli
NeuroScout command line interface
https://neuroscout-cli.readthedocs.io/en/latest/
BSD 3-Clause "New" or "Revised" License
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Simplify installation code by loading from pyNS
#161
adelavega
opened
1 year ago
0
Add docs
#160
adelavega
closed
2 years ago
0
Add RTD documentation
#159
adelavega
closed
2 years ago
0
Add Google Colab Demo Notebook
#158
adelavega
closed
2 years ago
1
No-get skip DataLad but not Get set up
#157
adelavega
closed
2 years ago
0
ValueError: group_by contains variable(s) ['group'] that could not be found in the entity index.
#156
adelavega
opened
2 years ago
2
run in google collab / binder
#155
adelavega
closed
2 years ago
1
Fix DataLad progress bars
#154
adelavega
opened
2 years ago
0
TMP: Test DataLad progress
#153
adelavega
opened
2 years ago
0
FIX: Save dataset_dir to allow DataLad to get files
#152
adelavega
closed
2 years ago
0
Fix incorrect CLI flags
#151
adelavega
closed
2 years ago
0
[RF] Pass arbitrary arguments to FitLins, use click instead of Docopt
#150
adelavega
closed
2 years ago
1
Cache pybids database for dataset to speed up loading large datasets (i.e. narratives)
#149
adelavega
opened
2 years ago
0
Simplify neuroscout-cli fitlins wrapper
#148
adelavega
closed
2 years ago
1
Convert BIDS Stats models to v1
#147
adelavega
closed
2 years ago
5
Speed up indexing and fetching of relevant files w/ custom logic
#146
adelavega
closed
2 years ago
0
retcode reference before assignment in upload only mode
#145
adelavega
closed
2 years ago
0
Upload full provenance of CLI command used
#144
adelavega
closed
2 years ago
0
FIX: Smoothing in fitlins occurs at incorrect level
#143
adelavega
closed
2 years ago
0
Allow users to pick when to smooth
#142
adelavega
closed
2 years ago
1
FIX: Pass n-cpus
#141
adelavega
closed
2 years ago
0
Catch failures from fitlins
#140
adelavega
closed
2 years ago
0
Save options to disk
#139
adelavega
closed
3 years ago
0
on upload only: still upload meta-data such as estimator.
#138
adelavega
closed
3 years ago
0
Change back to GITHUB_TOKEN
#137
adelavega
closed
3 years ago
0
Use tag for address
#136
adelavega
closed
3 years ago
0
Add singularity builds
#135
adelavega
closed
3 years ago
0
Add github actions
#134
adelavega
closed
3 years ago
1
Fix upload grabbing
#133
adelavega
closed
3 years ago
0
setup github actions for docker hub pushing
#132
adelavega
closed
3 years ago
0
use datalad run to run fitlins
#131
adelavega
closed
2 years ago
0
FIX: Don't drop if -i defined
#130
adelavega
closed
3 years ago
0
REL: 0.5.1
#129
adelavega
closed
3 years ago
0
bump pynv
#128
adelavega
closed
3 years ago
0
REF: Refactor directory structure
#127
adelavega
closed
3 years ago
9
New release with pyBIDS fix, after confirming it works
#126
adelavega
closed
3 years ago
0
infer preproc folder name
#125
adelavega
closed
3 years ago
1
Re-configure directory defaults
#124
adelavega
closed
3 years ago
10
Release neuroscout-cli 0.5.
#123
adelavega
closed
3 years ago
0
REL: new neuroscout-cli version
#122
adelavega
closed
3 years ago
0
neuroscout-cli bump fitlins version and test
#121
adelavega
closed
3 years ago
0
fitlins REL 0.9
#120
adelavega
closed
3 years ago
0
Fitlins: disable automatic drift modeling
#119
adelavega
closed
3 years ago
0
Fitins: writout estimator
#118
adelavega
closed
3 years ago
0
Look for all stat maps when uploading
#117
adelavega
closed
3 years ago
0
Add estimator to CLI
#116
adelavega
closed
3 years ago
1
Support alternative subfolders for preproc
#115
adelavega
closed
3 years ago
0
Log fmriprep and cli versions with upload
#114
adelavega
closed
3 years ago
1
where would it make sense to test running an analysis?
#113
jdkent
opened
3 years ago
3
REL: 0.4.1
#112
adelavega
closed
3 years ago
0
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