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neurospin / pypreprocess

Preprocessing scripts for neuro imaging
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Pure python pipeline example is broken #175

Open mrahim opened 9 years ago

mrahim commented 9 years ago

Although we don't use often pure python functions, the code should be refactored. We should also take into account nilearn's check_niimg functions.

AlexandreAbraham commented 8 years ago

This one seems doable to me, plus there is "nilearn" in the description.

KamalakerDadi commented 8 years ago

@mrahim this is what you are pointing at ? Traceback (most recent call last): File "pure_python_preproc_demo.py", line 16, in tsdiffana=True, realign=True, report=True, reslice=True) File "/home/kamalakar/Kamalakar/work/pypreprocess/pypreprocess/purepython_preproc_utils.py", line 281, in do_subject_preproc n_sessions = len(subject_data.session_ids) TypeError: object of type 'NoneType' has no len()