nextflow-io / nextflow

A DSL for data-driven computational pipelines
http://nextflow.io
Apache License 2.0
2.73k stars 626 forks source link

Nextflow image with podman and fuse-overlayfs #3096

Closed sanderthierens closed 2 years ago

sanderthierens commented 2 years ago

Would it be possible to make a nextflow image available on docker hub containing a Podman and fuse-overlayfs install. As for now the only containerization framework included in the images is Docker. This would allow us to use podman containers while running the nextflow pipeline inside a container (Podman-in-Podman).

bentsherman commented 2 years ago

You are welcome to build on the existing Nextflow docker image by installing podman and fuse-overlayfs, if you would like to test it for yourself.