Project 7: Nextflow modules, components and data plugins - Githubissues

nextflow-io / nf-hack17

Nextflow hackathon 2017 projects

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Project 7: Nextflow modules, components and data plugins #7

Open evanfloden opened 7 years ago

evanfloden commented 7 years ago

Nextflow modules, components and data plugins

Implement and expand on and the ideas from the repository here.

Nextflow modules could encapsulate the definitions of similar tools, referred to as components.
Each module would be made of components which could share the same data input/output types.
Individual components would contain their own specific commands and execution environments (containers).
Implement mechanisms for downloading/caching data from sources relevant to the module.

Example Module readMapping

Example Component kallisto

Data:

Any data relevant to the modules developed.

Project Lead:

Evan Floden (@skptic)

viklund commented 6 years ago

I'm interested in this one.

evanfloden commented 6 years ago

Repo for CWL tool to NF process: https://github.com/viklund/CwlCmd2nf