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nextflow-io / nf-prov

Apache License 2.0
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Nextflow processes with `exec` do not show up in the Legacy Renderer #29

Open stevekm opened 5 months ago

stevekm commented 5 months ago

Just an observation, not sure if this is intentional or a known issue, but if you have a Nextflow process like this


process EXEC_FOO {
    input:
    tuple val(prefix), val(constant)

    output:
    path(outputfile)

    exec:
    println ">>> EXEC: ${prefix}, ${constant}"
    outputfile = new File("${task.workDir}/${prefix}.exec.txt")
    outputfile.write(constant)
}

it does not seem to show up in the legacy manifest JSON output

bentsherman commented 5 months ago

Does it appear in the BCO output?

stevekm commented 3 months ago

No it does not seem to appear in either. See the results from running the PR #31