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nextflow-io / patterns

A curated collection of Nextflow implementation patterns
http://nextflow-io.github.io/patterns/
MIT License
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Simple exmaple of joined two workflows #2

Closed jgrzebyta closed 8 years ago

jgrzebyta commented 8 years ago

I have added simple example of joining two workflows using shell pipe | command.

jgrzebyta commented 8 years ago

I have implemented JSON communication between the workflows as a protocol. I will update this request for that but first I would like to set up the communication way using file.

jgrzebyta commented 8 years ago

Done. I have used JSON support in workflows for communication between them. For now a .json file is used for that so option -q is not required. Also the workflows are launched one after another.

pditommaso commented 8 years ago

Thanks for your PR but I'm not merging it because this repository is meant to show core language features. You technique it's an interesting approach that deserve to be publish in a blog post or even a separate GitHub project. In that case I would be happy to link it in the awesome-nextflow page.