funannotate sort --minlen not working

[abretaud]

Are you using the latest release? using master branch

Describe the bug the --minlen option of funannotate sort isno longer working (writing smaller contigs)

What command did you issue? funannotate sort --input input.fa --out output.fa --base 'something' --minlen 2100

The if/else logic is not working as expected after recent refactoring at https://github.com/nextgenusfs/funannotate/blob/afeeb4d49ea00aad3bd25590cf66edd9575e237f/funannotate/sort.py#L36

[hyphaltip]

I can fix that - you can also use AAFTF for sorting.

[abretaud]

Thanks, the fix works!