nextgenusfs / funannotate

Eukaryotic Genome Annotation Pipeline
http://funannotate.readthedocs.io
BSD 2-Clause "Simplified" License
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Feature: utils gbk2parts dump same funannotate output files #936

Open hyphaltip opened 11 months ago

hyphaltip commented 11 months ago

I think we should have gbk2parts dump the same cds-transcripts.fa files from a gbk file in addition to transcript and proteins file. I am working from sqn and gbk files for something and I would like to use funannotate to dump the gff, genome, CDS, mRNA, and protein files from the input in a consistent way that funannotate generates.