nextstrain / augur

Pipeline components for real-time phylodynamic analysis
https://docs.nextstrain.org/projects/augur/
GNU Affero General Public License v3.0
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parse: Prefer `strain` over `name` as sequence ID field #1629

Closed victorlin closed 2 weeks ago

victorlin commented 3 weeks ago

Description of proposed changes

Following through with deprecation.

Related issue(s)

Checklist

codecov[bot] commented 3 weeks ago

Codecov Report

All modified and coverable lines are covered by tests :white_check_mark:

Project coverage is 71.06%. Comparing base (db54927) to head (5e0bc54). Report is 13 commits behind head on master.

Additional details and impacted files ```diff @@ Coverage Diff @@ ## master #1629 +/- ## ======================================= Coverage 71.06% 71.06% ======================================= Files 79 79 Lines 8268 8268 Branches 2010 2009 -1 ======================================= Hits 5876 5876 Misses 2101 2101 Partials 291 291 ```

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