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nextstrain / auspice.us

http://auspice.us
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Bump auspice from 2.52.1 to 2.54.0 #86

Closed dependabot[bot] closed 5 months ago

dependabot[bot] commented 5 months ago

Bumps auspice from 2.52.1 to 2.54.0.

Release notes

Sourced from auspice's releases.

Auspice 2.54.0

  • Add a link-out to use datasets in Nextclade (this functionality is only enabled when running within the larger nextstrain.org ecosystem.) This builds on functionality introduced in Nextclade 3.7.0 allowing an Auspice dataset to be used as a nextclade dataset so that users can then add new sequences (via drag-and-drop) and see them placed on the tree. (#1776)

Auspice 2.53.0

  • Add a download-JSON button within the downloads modal. This is disabled for GISAID sourced data. (#1764)
  • Add link-outs to load the current dataset in external platforms MicrobeTrace and Taxonium. Note this functionality only works when Auspice is running within the larger nextstrain.org server. (#1763)

Internal changes.

  • Use Nextstrain CLI to create PRs on other repos. (#1765)
  • Create PRs on projects which depend on Auspice by adding a label (#1767 and #1768)
Changelog

Sourced from auspice's changelog.

version 2.54.0 - 2024/06/06

  • Add a link-out to use datasets in Nextclade (this functionality is only enabled when running within the larger nextstrain.org ecosystem.) This builds on functionality introduced in Nextclade 3.7.0 allowing an Auspice dataset to be used as a nextclade dataset so that users can then add new sequences (via drag-and-drop) and see them placed on the tree. (#1776)

version 2.53.0 - 2024/04/29

  • Add a download-JSON button within the downloads modal. This is disabled for GISAID sourced data. (#1764)
  • Add link-outs to load the current dataset in external platforms MicrobeTrace and Taxonium. Note this functionality only works when Auspice is running within the larger nextstrain.org server. (#1763)

Internal changes.

  • Use Nextstrain CLI to create PRs on other repos. (#1765)
  • Create PRs on projects which depend on Auspice by adding a label (#1767 and #1768)
Commits
  • ef18c1f version bump to 2.54.0 for release
  • 071ed3c changelog
  • 7389328 Merge pull request #1776 from nextstrain/james/nextclade-linkout
  • e526494 [link out modal] add nextclade link-out
  • d9b824a chore: set link target for conda image shields to useful websites
  • 9c5d4b2 chore: add bioconda version and platform/arch shields to README
  • 9f6e542 [link out modal] refactor
  • b8e057b [minor] fix typo
  • b63eb8a version bump to 2.53.0 for release
  • 3f30899 changelog
  • Additional commits viewable in compare view


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jameshadfield commented 5 months ago

None of these changes will be usable in the auspice.us context, but equally keeping it up-to-date is cleaner