nextstrain / dengue

Nextstrain build for dengue virus
https://nextstrain.org/dengue
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Consistent serotype-genotype column names and auspice color titles #51

Closed j23414 closed 2 months ago

j23414 commented 2 months ago

Description of proposed changes

For Dengue serotype, genotype, and the various methods we employ to derive them for a specific strain (NCBI, Nextclade, augur clades (Nextstrain)), this PR is an implementation of consistent metadata column names and auspice color titles following the plan in https://github.com/nextstrain/dengue/issues/41#issuecomment-2113248913

Related issue(s)

Checklist

Link to test builds from this branch:

genome E gene
all all/genome all/E
denv1 denv1/genome denv1/E
denv2 denv2/genome denv2/E
denv3 denv3/genome denv3/E
denv4 denv4/genome denv4/E

or for a visual summary of the default color titles for the different trees: