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nextstrain / fauna

RethinkDB database to support real-time virus analysis
GNU Affero General Public License v3.0
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Remove fuzzy matching on vdb upload #57

Closed trvrb closed 6 years ago

trvrb commented 7 years ago

I'm pretty sure we can remove

Adjusting strain names to match identical strains in documents to be uploaded
Using vdb.flu_viruses to adjust strain names to match strains already in vdb.flu_viruses
Adjusting accessions to match identical sequences in documents to be uploaded
Using vdb.flu_sequences to adjust accessions to match sequences already in vdb.flu_sequences

from vdb/upload. I need to test this however to make sure it doesn't break anything.

trvrb commented 6 years ago

This was removed in 8cab5f8c9a35f9fe480f1059ccf23114c9032331 and everything seems to be working just fine.