Migrate to augur curate - Githubissues

nextstrain / lassa

Nextstrain build for Lassa virus

https://nextstrain.org/staging/lassa

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Migrate to augur curate #9

Closed j23414 closed 4 months ago

j23414 commented 4 months ago

Description of proposed changes

Updates the curate rule to use the new augur curate commands. Updates ingest/vendored to pull in latest changes including https://github.com/nextstrain/ingest/pull/45.

Related issue(s)

Mirrors changes from https://github.com/nextstrain/pathogen-repo-guide/pull/53

Checklist

[x] Checks pass