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nextstrain / measles

Nextstrain build for measles virus
https://nextstrain.org/measles
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Call measles genotypes during ingest and display on tree #32

Closed trvrb closed 6 days ago

trvrb commented 1 month ago

With Nextclade dataset in hand, we should process sequences during ingest to assign a MeV genotype (like we do for SARS-CoV-2 and mpox). This MeV genotype should included as a coloring to the measles tree for both https://nextstrain.org/measles/N450 and https://nextstrain.org/measles/genome.

kimandrews commented 1 month ago

A preliminary version of this is currently available on this branch. It is a work in progress.

kimandrews commented 6 days ago

This was completed in https://github.com/nextstrain/measles/pull/36