Add genbank_accession_rev field

[chaoran-chen]

Context

For the "open" instance of LAPIS, we use data from https://data.nextstrain.org/files/ncov/open/. It would be very useful if users can know which version of the sequences they are getting from LAPIS but unfortunately, the genbank_accession field in the metadata.tsv file only contains the accession without the version number suffix (e.g., OV377246).

The mpox data already contains a field with the version number.

Description

It would be great to have an additional column (genbank_accession_rev?) that contains the version number as well (e.g., OV377246.1).

(cc @cecivale)

[j23414]

Looks like we're pulling "genbank_accession_rev" here:

• https://github.com/nextstrain/ncov-ingest/blob/master/bin/genbank-url#L49

But somehow it's not being passed onward to the metadata. For Dengue, I had to add it to the list of output columns like

• https://github.com/nextstrain/dengue/blob/new_ingest/ingest/config/config.yaml#L54

But in ncov-ingest I think we'd have to add it to:

• https://github.com/nextstrain/ncov-ingest/blob/master/lib/utils/transform.py#L8

@joverlee521 does that look right?