These have been unused since we transitioned to using touchfiles to do full Nextclade runs.¹ These scripts are also outdated since we've added new translation outputs to the automated workflow runs.²
This was also motivated by our recent push to deduplicate ingest scripts. Since a lot of changes in notify-on-job-start unique to this repo were added to support the run-nextclade-full scripts³, it will simplify the centralized version of notify-on-job-start by removing the unused scripts here.
Description of proposed changes
These have been unused since we transitioned to using touchfiles to do full Nextclade runs.¹ These scripts are also outdated since we've added new translation outputs to the automated workflow runs.²
This was also motivated by our recent push to deduplicate ingest scripts. Since a lot of changes in
notify-on-job-startunique to this repo were added to support therun-nextclade-fullscripts³, it will simplify the centralized version ofnotify-on-job-startby removing the unused scripts here.¹ https://github.com/nextstrain/ncov-ingest/pull/380 ² https://github.com/nextstrain/ncov-ingest/pull/404 ³ https://github.com/nextstrain/ncov-ingest/compare/88be153e02acc5f318c970dcf44e8745128d469f...e898400a0ebf599dcb9e69f1f93dc8c108c97796