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nextstrain / ncov-ingest

A pipeline that ingests SARS-CoV-2 (i.e. nCoV) data from GISAID and Genbank, transforms it, stores it on S3, and triggers Nextstrain nCoV rebuilds.
MIT License
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Sync vendored scripts #419

Closed victorlin closed 8 months ago

victorlin commented 9 months ago

Description of proposed changes

There are new scripts in nextstrain/ingest. I did a quick check and none of them are used in this repo. Doesn't hurt to pull them in anyways.

Related issue(s)

b38be5c94610ab9b530a99d5f2ba08f8f9231c72 is a follow-up to https://github.com/nextstrain/ingest/pull/24#discussion_r1333463493

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