A pipeline that ingests SARS-CoV-2 (i.e. nCoV) data from GISAID and Genbank, transforms it, stores it on S3, and triggers Nextstrain nCoV rebuilds.
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fetch-and-ingest: Explicitly test FETCH_FROM_DATABASE #444
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joverlee521 closed 7 months ago
Prompted by post-merge review https://github.com/nextstrain/ncov-ingest/pull/440#discussion_r1571480694
Instead of running
true
andfalse
programs, explicitly test thatFETCH_FROM_DATABASE
is true.Checklist