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nextstrain / nextclade

Viral genome alignment, mutation calling, clade assignment, quality checks and phylogenetic placement
https://clades.nextstrain.org
MIT License
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Link mutations to nextstrain.org #86

Open ivan-aksamentov opened 4 years ago

ivan-aksamentov commented 4 years ago

We want to add clickable links into mutation tooltips. These links would lead to the corresponding mutation view in nextstrain.org/ncov colored by the mutated nucleotide.

For example, the mutations at position 11083 would have a link that leads to this URL:

https://nextstrain.org/ncov/global?c=gt-nuc_11083

Tooltip

This is a great way to integrate the tool with nextstrain.org and will hopefully help to grow the ecosystem further.

This would require tooltips or any other informational widgets containing the link to persist, so that the link can be clicked #83 #84 #85

ivan-aksamentov commented 3 years ago

A few examples of links to aminoacid mutations and deletions:

https://nextstrain.org/ncov/global?c=gt-S_681
https://nextstrain.org/ncov/global?c=gt-S_681&gt=S.681P
https://nextstrain.org/ncov/global?c=gt-ORF1a_3676