Closed miparedes closed 2 months ago
related to issue #7
A temporary fix to manually remove duplicates and change the name displayed in the auspice json from accession to strain name. This allows for the visualization of the tanglegrams to investigate recombination.
This might be replaced by https://github.com/nextstrain/pathogen-repo-guide/issues/59#issuecomment-2290496196 in future.
Example tanglegram: https://nextstrain.org/staging/oropouche/L:staging/oropouche/M
related to issue #7
A temporary fix to manually remove duplicates and change the name displayed in the auspice json from accession to strain name. This allows for the visualization of the tanglegrams to investigate recombination.
This might be replaced by https://github.com/nextstrain/pathogen-repo-guide/issues/59#issuecomment-2290496196 in future.
Example tanglegram: https://nextstrain.org/staging/oropouche/L:staging/oropouche/M