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nextstrain / pathogen-repo-guide

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Update nextclade workflow docs for v3 #70

Closed joverlee521 closed 2 weeks ago

joverlee521 commented 2 weeks ago

Description of proposed changes

  1. nextclade/export: Update REQUIRED INPUTS for Nextclade v3
  2. Update example test_dataset command to nextclade3

Related issue(s)

Resolves https://github.com/nextstrain/pathogen-repo-guide/issues/69

Checklist

joverlee521 commented 2 weeks ago

Will merge this ~tomorrow if there's are no comments.