nextstrain / seasonal-flu

Scripts. config, and snakefiles for seasonal-flu nextstrain builds
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Add rules to upload parsed sequences and metadata #108

Closed huddlej closed 1 year ago

huddlej commented 1 year ago

Description of proposed changes

Updates the "upload" profile's custom rules to support uploading parsed sequences (per lineage and segment) and metadata (per lineage) and updates the "upload" GitHub Action to request these new targets for the workflow.

Related issue(s)

Resolves #107

Testing