Add a flag to make it possible to run a more in-depth run of mosdepth

nf-cmgg / germline

A nextflow pipeline for calling and annotating small germline variants from short DNA reads for WES and WGS data

https://nf-cmgg.github.io/germline/

MIT License

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Closed nvnieuwk closed 1 year ago

nvnieuwk commented 1 year ago

This flag should make mosdepth do a non-fast mode and output all files. When this flag is enabled, the callable input files will not be used.

nvnieuwk commented 1 year ago

Added in #100