Add UPDio to the pipeline

nf-cmgg / germline

A nextflow pipeline for calling and annotating small germline variants from short DNA reads for WES and WGS data

https://nf-cmgg.github.io/germline/

MIT License

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Closed nvnieuwk closed 5 months ago

nvnieuwk commented 5 months ago

This PR adds UPDio to the pipeline. Tests are probably failing, but I will rewrite them in the next PR so I didn't bother with it right now