Standardize resource request to 8c/64gb

nf-cmgg / germline

A nextflow pipeline for calling and annotating small germline variants from short DNA reads for WES and WGS data

https://nf-cmgg.github.io/germline/

MIT License

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Standardize resource request to 8c/64gb #68

Closed matthdsm closed 1 year ago

matthdsm commented 1 year ago

Description of feature

We are standardizing our cluster to 8c/64gb so base.conf should reflect that

nvnieuwk commented 1 year ago

Although wouldn't it be better to add this to the config we use on our home clusters? Those will overwrite any existing labels if I remember correctly?

matthdsm commented 1 year ago

nope, default configs should be geared towards our own cluster so the pipeline runs with as minimal config as possible. Extra settings for HPC or other clusters are less important

nvnieuwk commented 1 year ago

Fair point!