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nf-cmgg / structural

A bioinformatics best-practice analysis pipeline for calling structural variants (SVs), copy number variants (CNVs) and repeat region expansions (RREs) from short DNA reads
https://nf-cmgg.github.io/structural/
MIT License
18 stars 3 forks source link

Fully add annotation #34

Closed nvnieuwk closed 1 year ago

nvnieuwk commented 1 year ago

Description of feature

Run AnnotSV and Ensembl VEP in parallel. Use the Ensembl VEP VCF as input to VCFanno and use the AnnotSV TSV file as an annotation source

nvnieuwk commented 1 year ago

Added in #35