nf-cmgg / structural

A bioinformatics best-practice analysis pipeline for calling structural variants (SVs), copy number variants (CNVs) and repeat region expansions (RREs) from short DNA reads
https://nf-cmgg.github.io/structural/
MIT License
18 stars 3 forks source link

Update tests #62

Closed nvnieuwk closed 6 months ago

nvnieuwk commented 9 months ago

Description of feature

Change the tests to a more unit test/modular approach where each part is tested for all possible inputs and outputs. Only run the whole pipeline in stub form to test the connection between all parts