Fully support conda for all modules

nf-cmgg / structural

A bioinformatics best-practice analysis pipeline for calling structural variants (SVs), copy number variants (CNVs) and repeat region expansions (RREs) from short DNA reads

https://nf-cmgg.github.io/structural/

MIT License

18 stars 3 forks source link

Fully support conda for all modules #70

Open nvnieuwk opened 7 months ago

nvnieuwk commented 7 months ago

Description of the bug

Conda isn't supported for all modules for now (especially qdnaseq is missing a conda declaration for now). This should be fixed to increase the usability of the pipeline

Command used and terminal output

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Relevant files

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System information

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