Make the workflow pluggable

nf-cmgg / structural

A bioinformatics best-practice analysis pipeline for calling structural variants (SVs), copy number variants (CNVs) and repeat region expansions (RREs) from short DNA reads

https://nf-cmgg.github.io/structural/

MIT License

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Make the workflow pluggable #90

Closed nvnieuwk closed 3 months ago

nvnieuwk commented 4 months ago

Description of feature

Remove all mentions of params in the workflows and add them all as inputs to the workflows/subworkflows Emit all sensible outputs from the main workflow too

nvnieuwk commented 3 months ago

Added in #91