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nf-core / airrflow

B-cell and T-cell Adaptive Immune Receptor Repertoire (AIRR) sequencing analysis pipeline using the Immcantation framework
https://nf-co.re/airrflow
MIT License
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Clone tables after `define clone` process only contain `IGH` - `TRB` clones #232

Open ggabernet opened 1 year ago

ggabernet commented 1 year ago

Description of feature

The clone tables after the define clones process only contain IGH or TRB clones. The filtering is done to calculate the clonal abundance and diversity only on one of the chains of the repertoire, but in my opinion the tsv table should contain the sequences / clones from all chains.