As reported privately by airrflow user:
It could be useful to include the cdr1_aa, cdr2_aa, cdr3_aa, fw1_aa, fw2_aa, fw3_aa and fw3_aa columns to the AIRR repertoires generated by this pipeline. That way they can be directly imported into ‘Immunarch’ with the repLoad() function for further downstream analysis.
Description of feature
As reported privately by airrflow user: It could be useful to include the cdr1_aa, cdr2_aa, cdr3_aa, fw1_aa, fw2_aa, fw3_aa and fw3_aa columns to the AIRR repertoires generated by this pipeline. That way they can be directly imported into ‘Immunarch’ with the repLoad() function for further downstream analysis.