Add baseDir to testdata paths and update container path

nf-core / bamtofastq

Converts bam or cram files to fastq format and does quality control.

https://nf-co.re/bamtofastq

MIT License

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Add baseDir to testdata paths and update container path #10

Closed matrulda closed 4 years ago

matrulda commented 4 years ago

When testing to pull the code from github (nextflow run qbic-pipelines/bamtofastq -profile test,singularity), I noticed that the test files weren't found. So I added baseDir to the paths.

Also updated the container path.