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nf-core / bamtofastq

Converts bam or cram files to fastq format and does quality control.
https://nf-co.re/bamtofastq
MIT License
21 stars 13 forks source link

added new flags to summary and enabled fast compression #34

Closed SusiJo closed 1 year ago

SusiJo commented 3 years ago

PR checklist

FriederikeHanssen commented 3 years ago

Is the -b1 compression lossless?

SusiJo commented 3 years ago

Yes, it seems to be faster due to less compression than the default. See here and here