nf-core / bamtofastq

Converts bam or cram files to fastq format and does quality control.
https://nf-co.re/bamtofastq
MIT License
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URGENT: pin nf-validation version #79

Closed nvnieuwk closed 5 months ago

nvnieuwk commented 6 months ago

Description of the bug

To prevent breaking this pipeline in the near future, the nf-validation version should be pinned to version 1.1.3 like:

plugins {
    id 'nf-validation@1.1.3'
}

Command used and terminal output

No response

Relevant files

No response

System information

No response

mirpedrol commented 5 months ago

Hello!

⚠️ The nf-validation plugin will have soon a new release (v2.0) which has breaking changes. This will break the usage of all pipelines that don't pin the version of this plugin, as Nextflow tries to pull the latest version.

asp8200 commented 5 months ago

@FriederikeHanssen : The version of nf-validation has already been done on the dev-branch.