Perhaps fasta needs to be a "required" parameter, that is, perhaps the pipeline should fail immediately if the fasta paramenter isn't set to an (existing) fasta-file?
Command used and terminal output
wget https://raw.githubusercontent.com/nf-core/test-datasets/bamtofastq/samplesheet/test_bam_samplesheet.csv
nextflow run nf-core/bamtofastq -r 2.1.0 -profile docker --outdir out --input test_bam_samplesheet.csv
asp8200
commented
1 month ago
Description of the bug
Perhaps fasta needs to be a "required" parameter, that is, perhaps the pipeline should fail immediately if the fasta paramenter isn't set to an (existing) fasta-file?
Command used and terminal output