Closed asp8200 closed 3 months ago
Issue #92
Updating samtools to 1.19.2 in local module CHECK_IF_PAIRED_END.
I the following commands successfully :
nextflow run main.nf -profile test,conda --outdir results nextflow run main.nf -profile test,singularity --outdir results nextflow run main.nf -profile test,docker --outdir results
nf-core lint
nf-test test main.nf.test -profile test,docker
nextflow run . -profile debug,test,docker --outdir <OUTDIR>
docs/usage.md
docs/output.md
CHANGELOG.md
README.md
Posted for pipeline commit e62fab4
+| ✅ 194 tests passed |+ !| ❗ 3 tests had warnings |!
Issue #92
Updating samtools to 1.19.2 in local module CHECK_IF_PAIRED_END.
I the following commands successfully :
PR checklist
nf-core lint
).nf-test test main.nf.test -profile test,docker
).nextflow run . -profile debug,test,docker --outdir <OUTDIR>
).docs/usage.md
is updated.docs/output.md
is updated.CHANGELOG.md
is updated.README.md
is updated (including new tool citations and authors/contributors).