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nf-core
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chipseq
ChIP-seq peak-calling, QC and differential analysis pipeline.
https://nf-co.re/chipseq
MIT License
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Fix save_unaligned parameter description in schema
#395
JoseEspinosa
opened
59 minutes ago
1
Fix save_unaligned parameter description in schema
#394
JoseEspinosa
closed
1 hour ago
1
Merge template version 2.14.1
#393
JoseEspinosa
closed
1 day ago
2
check: Adding line number to error messages.
#392
smoe
opened
1 day ago
0
Get rid of lib to merge tools v2.14.1
#391
JoseEspinosa
closed
1 day ago
1
Important! Template update for nf-core/tools v2.14.1
#390
nf-core-bot
closed
1 day ago
0
Important! Template update for nf-core/tools v2.14.0
#389
nf-core-bot
closed
1 month ago
1
Macs2 Output
#388
kittyBS
opened
1 month ago
0
Remove lib folder to get ready for v2.13.1 template merge
#387
JoseEspinosa
closed
1 hour ago
1
IDR analysis
#386
ZeinBader
opened
3 months ago
0
Improve website on parameters section Alignment Options for argument --save_unaligned
#385
aghr
opened
3 months ago
0
Can't run if there is no control
#384
d-jch
opened
4 months ago
0
Important! Template update for nf-core/tools v2.13.1
#383
nf-core-bot
closed
1 month ago
1
There are multiple files for each of the following file names
#382
smsobera
closed
3 months ago
0
Important! Template update for nf-core/tools v2.13
#381
nf-core-bot
closed
4 months ago
1
Merging template 2.12
#380
JoseEspinosa
closed
4 months ago
1
Important! Template update for nf-core/tools v2.12
#379
nf-core-bot
closed
4 months ago
1
Update MACS to v3
#378
alexpmagalhaes
opened
5 months ago
0
jobs failing with sigbus and unknown userid errors
#377
mniederhuber
closed
5 months ago
1
Error running the pipline test in the BWA index step
#376
Alhajuji
opened
5 months ago
0
Error with NextSeq trimming
#375
gitMakeCoffee
opened
6 months ago
0
MACS2: Too few paired peaks (0) so I can not build the model!
#374
dannyjwan
opened
6 months ago
0
Important! Template update for nf-core/tools v2.11.1
#373
nf-core-bot
closed
5 months ago
1
Important! Template update for nf-core/tools v2.11
#372
nf-core-bot
closed
6 months ago
1
Fix stack overflow
#371
krokicki
closed
7 months ago
1
PHANTOMPEAKQUALTOOLS throws stack overflow exception
#370
krokicki
closed
7 months ago
1
minor "samplesheet_pe.csv" format issue
#369
hukai916
opened
8 months ago
0
Update code after nf-validation adoption
#368
JoseEspinosa
closed
8 months ago
1
Get rid of checkIfExists for params paths
#367
JoseEspinosa
opened
8 months ago
0
Merge template v2.10
#366
JoseEspinosa
closed
9 months ago
1
Important! Template update for nf-core/tools v2.10
#365
nf-core-bot
closed
9 months ago
0
Default values for p-value and FDR
#364
amibe1
opened
9 months ago
0
Fix publishDir paths in modules.config
#363
samuelruizperez
closed
8 months ago
1
Make subworkflows & modules available for nf-core tools
#362
kelly-sovacool
closed
8 months ago
1
No Space left on device error
#361
Shashankti
closed
10 months ago
3
package or namespace load failed for ‘UpSetR’
#360
Nicobouch
opened
11 months ago
3
Add missing comma to awsfulltest
#359
adamrtalbot
closed
11 months ago
1
Dev
#358
bjlang
closed
8 months ago
1
Normalisation of bigwig files
#357
alhh507
opened
11 months ago
0
mergeBed ERROR: Requested column 10, but database file - only has fields 1 - 9.
#356
JiahuaQu
closed
11 months ago
18
Process `NFCORE_CHIPSEQ:CHIPSEQ:ALIGN_BWA_MEM:BWA_MEM (EBAC_Input_REP2_T1)` terminated with an error exit status (1)
#355
JiahuaQu
closed
11 months ago
3
Merging template 2.9
#354
JoseEspinosa
closed
1 year ago
1
Important! Template update for nf-core/tools v2.9
#353
nf-core-bot
closed
1 year ago
0
Updates
#352
JoseEspinosa
closed
1 year ago
2
Update modules
#351
JoseEspinosa
closed
1 year ago
1
Feat/nf tests
#350
sateeshperi
opened
1 year ago
1
Make replicates explicit in samplesheet
#349
JoseEspinosa
closed
1 year ago
1
Problem with samplesheet
#348
peculiar97
closed
1 year ago
3
Header missing is in bowtie2 outputted bam files
#347
chiefcat
opened
1 year ago
0
Set a default registry outside of profile scope
#346
JoseEspinosa
closed
1 year ago
2
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