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nf-core / circrna

circRNA quantification, differential expression analysis and miRNA target prediction of RNA-Seq data
https://nf-co.re/circrna
MIT License
44 stars 21 forks source link

Unexpected error [StackOverflowError] #112

Closed csittz closed 5 months ago

csittz commented 5 months ago

Hi is there anything i need to setup before i can run this pipeline? i can run nextflow with rnaseq image so shouldn't be nextflow installation problem.

after git clone the folder, running the test i got this error

Linux CentOS 7

nextflow run circrna -profile test,docker --input circna_ss.csv --outdir result/
N E X T F L O W  ~  version 21.10.6
Launching `circrna/main.nf` [awesome_hypatia] - revision: 059337e827
WARNING: Could not load nf-core/config profiles: https://raw.githubusercontent.com/nf-core/configs/master/nfcore_custom.config
Unexpected error [StackOverflowError]
nictru commented 5 months ago

Could you try updating nextflow to the latest version (23.20.1)?

csittz commented 5 months ago

thanks. after updating nextflow it worked. thank you.