nf-core / deepmodeloptim

Stochastic Testing and Input Manipulation for Unbiased Learning Systems
https://nf-co.re/deepmodeloptim
MIT License
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[feat] add initial_weights #170

Closed suzannejin closed 3 months ago

suzannejin commented 4 months ago

[x] add flag initial_weights to the pipeline, then nextflow will make the file available for the python launchers to reach the file and provide it to the model. [x] also modified the yaml config parser so that single values can be provided by the yaml file, when it is not needed for ray tune to chose between a range of values [x] also fixed a bug in launch_predict.py where the argparse argument is wrongly set up as 'bool' instead of 'action=store_true'