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nf-core / deepmodeloptim

Stochastic Testing and Input Manipulation for Unbiased Learning Systems
https://nf-co.re/deepmodeloptim
MIT License
23 stars 9 forks source link

Readable way of providing combinations of configuration files to python #28

Closed suzannejin closed 8 months ago

suzannejin commented 8 months ago

Currently @alessiovignoli is implementing JSON based configuration files and parsing tools.

YAML is a more readable option, but can it handle the parsing of many combinations altogether and split them into individual configs to run each python launch independently through Nextflow?

It can be nice to explore this.