Double Check Documentation is current & up2date with latest nf-core standards

nf-core / demultiplex

Demultiplexing pipeline for sequencing data

https://nf-co.re/demultiplex

MIT License

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Double Check Documentation is current & up2date with latest nf-core standards #198

Closed apeltzer closed 1 month ago

apeltzer commented 2 months ago

Description of feature

Double Check Documentation is current & up2date with latest nf-core standards, in particular

latest template
all modules updated

use nf-validation for samplesheet and parameters

### Tasks
- [x] Latest template
- [x] All modules updated
- [x] nf-validation for samplesheet and parameters

atrigila commented 1 month ago

nf-validation has been replaced by nf-schema. However, nf-schema is currently not supported by the nf-core tooling. Using this new plugin will break the linting and schema builder. Other pipelines are still using the nf-validation plugin (e.g. sarek). In Slack, I was told the migration will most likely occur when the new plugin is fully supported,