Closed WackerO closed 7 months ago
nf-core lint
overall result: Passed :white_check_mark:Posted for pipeline commit 698a5b9
+| ✅ 160 tests passed |+
This should already be happening, let me check
Looks about right- just a small suggestion. Could you also post a file showing what it looks like now?
Sure! PXD043349.html.zip
This PR marks the points in the report volcano plots by color depending on their DE status (not DE, logFC DE, pval DE, logFC&pval DE). Motivated by a colleague who found https://bioconductor.org/packages/devel/bioc/vignettes/EnhancedVolcano/inst/doc/EnhancedVolcano.html (but I did not use that package): SRP254919_volcano.html.zip
PR checklist
nf-core lint
).nextflow run . -profile test,docker --outdir <OUTDIR>
).docs/usage.md
is updated.docs/output.md
is updated.CHANGELOG.md
is updated.README.md
is updated (including new tool citations and authors/contributors).