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nf-core / differentialabundance

Differential abundance analysis for feature/ observation matrices from platforms such as RNA-seq
https://nf-co.re/differentialabundance
MIT License
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Failed to publish file => double forward slashes #261

Open nick-youngblut opened 2 months ago

nick-youngblut commented 2 months ago

Description of the bug

For --outdir I included a trailing forward slash in the gs:// path, which resulted in Failed to publish file: warnings.

It appears that the pipeline is concatenating strings versus using file(params.outdir) / "path/to/output".

Command used and terminal output

`--outdir gs://path/to/output/` instead of `--outdir gs://path/to/output`

Relevant files

No response

System information