Open shreya-sharma20 opened 1 month ago
Additional suggestion to increase the RAM allocated for this process, e.g.
process {
withName: 'NFCORE_DIFFERENTIALABUNDANCE:DIFFERENTIALABUNDANCE:RMARKDOWNNOTEBOOK' {
memory = 200.GB
}
}
Could work with less than 200, just haven't tried it.
Description of feature
When analyzing a large number of samples using the differential abundance pipeline, the markdown notebook compilation step fails due to memory issues.
For now, I have increased the memory for this process.
Feature Request: It'll be helpful if there is a parameter to disable this process if reports are not required.