better handling of ext.args vs toolsheet args

nf-core / differentialabundance

Differential abundance analysis for feature/ observation matrices from platforms such as RNA-seq

https://nf-co.re/differentialabundance

MIT License

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Open suzannejin opened 1 month ago

suzannejin commented 1 month ago

[ ] handle the toolsheet arguments + ext.args in a way that the repeated arguments would be overwritten considering the hierarchy of the params: toolsheet > command line > config args > nextflow.config