nf-core / differentialabundance

Differential abundance analysis for feature/ observation matrices from platforms such as RNA-seq
https://nf-co.re/differentialabundance
MIT License
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Replace unmaintained Proteus with maxLFQ, by author's suggestion. #356

Open vmkalbskopf opened 1 week ago

vmkalbskopf commented 1 week ago

Description of feature

According to the authors of Proteus they no longer recommend using their package as a preliminary step before limma, but instead recommend using maxLFQ for protein normalisation.